Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLSTN1O94985 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.38■□□□□ 0.69
CLSTN1O94985 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.38■□□□□ 0.69
CLSTN1O94985 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLSTN1O94985 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.38■□□□□ 0.69
CLSTN1O94985 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.38■□□□□ 0.69
CLSTN1O94985 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.38■□□□□ 0.69
CLSTN1O94985 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.38■□□□□ 0.69
CLSTN1O94985 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLSTN1O94985 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLSTN1O94985 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLSTN1O94985 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLSTN1O94985 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLSTN1O94985 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
CLSTN1O94985 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 CHCHD2P8-201ENST00000429873 447 ntBASIC19.37■□□□□ 0.69
CLSTN1O94985 KRT18P65-201ENST00000439811 1286 ntBASIC19.37■□□□□ 0.69
CLSTN1O94985 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 VENTXP7-201ENST00000475503 772 ntBASIC19.37■□□□□ 0.69
CLSTN1O94985 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.37■□□□□ 0.69
CLSTN1O94985 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.37■□□□□ 0.69
CLSTN1O94985 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.37■□□□□ 0.69
CLSTN1O94985 AL592071.1-201ENST00000611956 408 ntBASIC19.37■□□□□ 0.69
CLSTN1O94985 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLSTN1O94985 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.37■□□□□ 0.69
CLSTN1O94985 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CLSTN1O94985 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLSTN1O94985 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLSTN1O94985 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.36■□□□□ 0.69
CLSTN1O94985 FLJ13224-201ENST00000313737 1514 ntBASIC19.36■□□□□ 0.69
CLSTN1O94985 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLSTN1O94985 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLSTN1O94985 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.36■□□□□ 0.69
CLSTN1O94985 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CLSTN1O94985 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
CLSTN1O94985 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLSTN1O94985 AC090616.6-201ENST00000582640 721 ntBASIC19.36■□□□□ 0.69
CLSTN1O94985 AC009154.2-201ENST00000621177 724 ntBASIC19.36■□□□□ 0.69
CLSTN1O94985 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLSTN1O94985 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.36■□□□□ 0.69
CLSTN1O94985 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.36■□□□□ 0.69
CLSTN1O94985 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms