Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 LTB4R2-202ENST00000528054 3092 ntBASIC20.32■□□□□ 0.84
CDKL5O76039 AC116353.5-201ENST00000638148 1699 ntBASIC20.32■□□□□ 0.84
CDKL5O76039 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
CDKL5O76039 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKL5O76039 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKL5O76039 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDKL5O76039 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.31■□□□□ 0.84
CDKL5O76039 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKL5O76039 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKL5O76039 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKL5O76039 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.31■□□□□ 0.84
CDKL5O76039 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.31■□□□□ 0.84
CDKL5O76039 STK19B-204ENST00000512515 211 ntBASIC20.31■□□□□ 0.84
CDKL5O76039 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKL5O76039 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDKL5O76039 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKL5O76039 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.31■□□□□ 0.84
CDKL5O76039 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 AC009336.1-201ENST00000608941 1553 ntBASIC20.3■□□□□ 0.84
CDKL5O76039 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL5O76039 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDKL5O76039 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL5O76039 KLF4P1-201ENST00000412782 1185 ntBASIC20.3■□□□□ 0.84
CDKL5O76039 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL5O76039 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL5O76039 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.3■□□□□ 0.84
CDKL5O76039 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.3■□□□□ 0.84
CDKL5O76039 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 AC073592.5-201ENST00000624854 528 ntBASIC20.3■□□□□ 0.84
CDKL5O76039 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDKL5O76039 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKL5O76039 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKL5O76039 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CDKL5O76039 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL5O76039 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDKL5O76039 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.29■□□□□ 0.84
CDKL5O76039 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CDKL5O76039 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.29■□□□□ 0.84
CDKL5O76039 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDKL5O76039 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDKL5O76039 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.29■□□□□ 0.84
CDKL5O76039 AC132938.5-201ENST00000624980 1813 ntBASIC20.29■□□□□ 0.84
CDKL5O76039 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CDKL5O76039 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CDKL5O76039 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDKL5O76039 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKL5O76039 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDKL5O76039 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.28■□□□□ 0.84
CDKL5O76039 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDKL5O76039 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDKL5O76039 AP001094.4-201ENST00000579008 2176 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms