Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIM3O75382 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIM3O75382 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 AC046158.3-201ENST00000624947 2558 ntBASIC16.33■□□□□ 0.21
TRIM3O75382 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
TRIM3O75382 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRIM3O75382 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.33■□□□□ 0.21
TRIM3O75382 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRIM3O75382 AL356309.3-201ENST00000624132 1934 ntBASIC16.33■□□□□ 0.21
TRIM3O75382 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
TRIM3O75382 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM3O75382 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRIM3O75382 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.33■□□□□ 0.21
TRIM3O75382 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIM3O75382 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRIM3O75382 AD000864.1-201ENST00000624076 2295 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRIM3O75382 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM3O75382 KRT16P4-201ENST00000453883 522 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 UNC93B7-201ENST00000509439 705 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM3O75382 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM3O75382 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.33■□□□□ 0.2
TRIM3O75382 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIM3O75382 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 AC111152.3-201ENST00000569699 673 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 AL691432.3-201ENST00000621860 400 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIM3O75382 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRIM3O75382 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRIM3O75382 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 AL645608.8-201ENST00000606034 2086 ntBASIC16.33■□□□□ 0.2
TRIM3O75382 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIM3O75382 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TRIM3O75382 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM3O75382 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.32■□□□□ 0.2
TRIM3O75382 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM3O75382 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.32■□□□□ 0.2
TRIM3O75382 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.32■□□□□ 0.2
TRIM3O75382 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.32■□□□□ 0.2
TRIM3O75382 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIM3O75382 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms