Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PLOD3O60568 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PLOD3O60568 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.5■□□□□ 0.23
PLOD3O60568 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.5■□□□□ 0.23
PLOD3O60568 AC091607.1-201ENST00000490318 1060 ntBASIC16.5■□□□□ 0.23
PLOD3O60568 AC122714.2-201ENST00000502787 707 ntBASIC16.5■□□□□ 0.23
PLOD3O60568 AC009533.2-201ENST00000543664 586 ntBASIC16.5■□□□□ 0.23
PLOD3O60568 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.5■□□□□ 0.23
PLOD3O60568 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PLOD3O60568 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PLOD3O60568 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PLOD3O60568 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PLOD3O60568 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
PLOD3O60568 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
PLOD3O60568 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.5■□□□□ 0.23
PLOD3O60568 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PLOD3O60568 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
PLOD3O60568 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.49■□□□□ 0.23
PLOD3O60568 AC002558.1-201ENST00000488906 803 ntBASIC16.49■□□□□ 0.23
PLOD3O60568 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.49■□□□□ 0.23
PLOD3O60568 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.49■□□□□ 0.23
PLOD3O60568 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PLOD3O60568 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PLOD3O60568 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.49■□□□□ 0.23
PLOD3O60568 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PLOD3O60568 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PLOD3O60568 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.48■□□□□ 0.23
PLOD3O60568 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.48■□□□□ 0.23
PLOD3O60568 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.48■□□□□ 0.23
PLOD3O60568 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.48■□□□□ 0.23
PLOD3O60568 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PLOD3O60568 FAM220CP-201ENST00000395253 831 ntBASIC16.48■□□□□ 0.23
PLOD3O60568 TOB2P1-201ENST00000469761 992 ntBASIC16.48■□□□□ 0.23
PLOD3O60568 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.48■□□□□ 0.23
PLOD3O60568 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.48■□□□□ 0.23
PLOD3O60568 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms