Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PCDH7O60245 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDH7O60245 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 FAM220CP-201ENST00000395253 831 ntBASIC16.7■□□□□ 0.26
PCDH7O60245 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH7O60245 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDH7O60245 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH7O60245 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.7■□□□□ 0.26
PCDH7O60245 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDH7O60245 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
PCDH7O60245 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH7O60245 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCDH7O60245 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 PCED1CP-201ENST00000419887 785 ntBASIC16.69■□□□□ 0.26
PCDH7O60245 TSSC2-201ENST00000450217 709 ntBASIC16.69■□□□□ 0.26
PCDH7O60245 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 AC091607.1-201ENST00000490318 1060 ntBASIC16.69■□□□□ 0.26
PCDH7O60245 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 AD000864.1-201ENST00000624076 2295 ntBASIC16.69■□□□□ 0.26
PCDH7O60245 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.69■□□□□ 0.26
PCDH7O60245 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH7O60245 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 KRT18P1-202ENST00000452408 1331 ntBASIC16.69■□□□□ 0.26
PCDH7O60245 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH7O60245 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDH7O60245 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDH7O60245 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDH7O60245 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDH7O60245 IER3-202ENST00000376377 1350 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms