Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.67■■□□□ 1.06
SRGAP3O43295 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.67■■□□□ 1.06
SRGAP3O43295 AC064862.7-201ENST00000604520 867 ntBASIC21.67■■□□□ 1.06
SRGAP3O43295 AL773604.1-201ENST00000617417 272 ntBASIC21.67■■□□□ 1.06
SRGAP3O43295 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.67■■□□□ 1.06
SRGAP3O43295 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRGAP3O43295 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.66■■□□□ 1.06
SRGAP3O43295 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.66■■□□□ 1.06
SRGAP3O43295 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SRGAP3O43295 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SRGAP3O43295 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.66■■□□□ 1.06
SRGAP3O43295 RNA5SP419-201ENST00000515908 135 ntBASIC21.66■■□□□ 1.06
SRGAP3O43295 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.66■■□□□ 1.06
SRGAP3O43295 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.66■■□□□ 1.06
SRGAP3O43295 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.66■■□□□ 1.06
SRGAP3O43295 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRGAP3O43295 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.66■■□□□ 1.06
SRGAP3O43295 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.65■■□□□ 1.06
SRGAP3O43295 AC097637.2-201ENST00000624096 1997 ntBASIC21.65■■□□□ 1.06
SRGAP3O43295 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SRGAP3O43295 HLA-A-201ENST00000376802 1334 ntBASIC21.65■■□□□ 1.06
SRGAP3O43295 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SRGAP3O43295 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.65■■□□□ 1.06
SRGAP3O43295 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.65■■□□□ 1.06
SRGAP3O43295 AL662844.1-201ENST00000546340 181 ntBASIC21.65■■□□□ 1.06
SRGAP3O43295 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.65■■□□□ 1.06
SRGAP3O43295 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.65■■□□□ 1.06
SRGAP3O43295 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SRGAP3O43295 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SRGAP3O43295 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SRGAP3O43295 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.64■■□□□ 1.06
SRGAP3O43295 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRGAP3O43295 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SRGAP3O43295 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 AL031284.1-201ENST00000419297 478 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 OR7E14P-202ENST00000530490 1290 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.64■■□□□ 1.05
SRGAP3O43295 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.64■■□□□ 1.05
SRGAP3O43295 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.64■■□□□ 1.05
SRGAP3O43295 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 AL049840.3-201ENST00000602669 611 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.64■■□□□ 1.05
SRGAP3O43295 FAM215A-202ENST00000632077 792 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 AC107918.4-202ENST00000641623 219 ntBASIC21.64■■□□□ 1.05
SRGAP3O43295 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SRGAP3O43295 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.64■■□□□ 1.05
SRGAP3O43295 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.63■■□□□ 1.05
SRGAP3O43295 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.63■■□□□ 1.05
SRGAP3O43295 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.63■■□□□ 1.05
SRGAP3O43295 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRGAP3O43295 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms