Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRIM38O00635 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM38O00635 RBM17P3-201ENST00000417687 1192 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM38O00635 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM38O00635 AC073648.2-201ENST00000510116 352 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 AC009533.2-201ENST00000543664 586 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM38O00635 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM38O00635 FAM215A-202ENST00000632077 792 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM38O00635 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM38O00635 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM38O00635 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.61■□□□□ 0.41
TRIM38O00635 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM38O00635 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRIM38O00635 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM38O00635 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM38O00635 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM38O00635 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
TRIM38O00635 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM38O00635 POLD2P1-201ENST00000511220 997 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 KRT18P58-201ENST00000527480 1120 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 AC106730.1-201ENST00000566722 1090 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 AC139887.3-201ENST00000568585 713 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 AL138831.2-201ENST00000606564 490 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM38O00635 INTS4P1-201ENST00000438455 1935 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM38O00635 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM38O00635 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM38O00635 AC084018.2-201ENST00000613093 2607 ntBASIC17.6■□□□□ 0.41
TRIM38O00635 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM38O00635 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM38O00635 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 KRT18P13-201ENST00000400056 1290 ntBASIC17.59■□□□□ 0.41
TRIM38O00635 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM38O00635 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 RPL13AP23-201ENST00000480739 586 ntBASIC17.59■□□□□ 0.41
TRIM38O00635 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM38O00635 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM38O00635 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM38O00635 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM38O00635 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRIM38O00635 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM38O00635 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM38O00635 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM38O00635 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM38O00635 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM38O00635 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms