Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 AP000523.1-201ENST00000398242 1049 ntBASIC16.41■□□□□ 0.22
KPNA4O00629 AC087499.1-201ENST00000418141 1075 ntBASIC16.41■□□□□ 0.22
KPNA4O00629 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
KPNA4O00629 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KPNA4O00629 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KPNA4O00629 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KPNA4O00629 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KPNA4O00629 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.41■□□□□ 0.22
KPNA4O00629 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KPNA4O00629 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KPNA4O00629 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
KPNA4O00629 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.41■□□□□ 0.22
KPNA4O00629 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KPNA4O00629 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 LINC00554-201ENST00000564841 3011 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 AL023973.1-201ENST00000624619 620 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 AC141257.4-201ENST00000634557 245 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 AC136944.6-201ENST00000634818 245 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KPNA4O00629 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 AC008741.2-201ENST00000612792 3115 ntBASIC16.4■□□□□ 0.22
KPNA4O00629 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.4■□□□□ 0.22
KPNA4O00629 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KPNA4O00629 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.39■□□□□ 0.22
KPNA4O00629 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
KPNA4O00629 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KPNA4O00629 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.39■□□□□ 0.21
KPNA4O00629 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.39■□□□□ 0.21
KPNA4O00629 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
KPNA4O00629 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 AC092850.2-201ENST00000623821 2697 ntBASIC16.39■□□□□ 0.21
KPNA4O00629 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
KPNA4O00629 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KPNA4O00629 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.39■□□□□ 0.21
KPNA4O00629 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.39■□□□□ 0.21
KPNA4O00629 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.39■□□□□ 0.21
KPNA4O00629 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KPNA4O00629 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.39■□□□□ 0.21
KPNA4O00629 GCSHP2-201ENST00000560971 527 ntBASIC16.39■□□□□ 0.21
KPNA4O00629 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.39■□□□□ 0.21
KPNA4O00629 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms