Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.66■□□□□ 0.74
DDX39AO00148 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX39AO00148 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX39AO00148 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX39AO00148 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX39AO00148 AC134043.2-201ENST00000624206 2238 ntBASIC19.66■□□□□ 0.74
DDX39AO00148 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DDX39AO00148 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX39AO00148 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
DDX39AO00148 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX39AO00148 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.65■□□□□ 0.74
DDX39AO00148 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 AC105339.3-201ENST00000560043 636 ntBASIC19.65■□□□□ 0.74
DDX39AO00148 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX39AO00148 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 PKD1P1-201ENST00000458669 6805 ntBASIC19.65■□□□□ 0.74
DDX39AO00148 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
DDX39AO00148 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX39AO00148 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX39AO00148 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
DDX39AO00148 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
DDX39AO00148 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 MYCLP1-201ENST00000372451 1075 ntBASIC19.64■□□□□ 0.73
DDX39AO00148 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX39AO00148 PRYP5-201ENST00000451909 266 ntBASIC19.64■□□□□ 0.73
DDX39AO00148 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX39AO00148 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.64■□□□□ 0.73
DDX39AO00148 RPL13AP23-201ENST00000480739 586 ntBASIC19.64■□□□□ 0.73
DDX39AO00148 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX39AO00148 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDX39AO00148 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DDX39AO00148 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
DDX39AO00148 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 AC097637.2-201ENST00000624096 1997 ntBASIC19.64■□□□□ 0.73
DDX39AO00148 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DDX39AO00148 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX39AO00148 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.63■□□□□ 0.73
DDX39AO00148 SLC25A6P5-201ENST00000435663 894 ntBASIC19.63■□□□□ 0.73
DDX39AO00148 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX39AO00148 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX39AO00148 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX39AO00148 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.63■□□□□ 0.73
DDX39AO00148 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms