Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.7□□□□□ -0.86
CHKB-CPT1BH3BT56 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 SNX18-202ENST00000343017 3140 ntBASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ABHD17AP3-201ENST00000503096 1137 ntBASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AC138035.3-201ENST00000622706 2791 ntBASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
CHKB-CPT1BH3BT56 AC106886.4-201ENST00000623557 2502 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AC106881.1-201ENST00000605849 3329 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AL805961.2-201ENST00000642139 4817 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms