Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.63■□□□□ 0.57
LCHNA4D1U4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 INGX-202ENST00000489074 768 ntBASIC18.63■□□□□ 0.57
LCHNA4D1U4 AC112191.1-201ENST00000523689 701 ntBASIC18.63■□□□□ 0.57
LCHNA4D1U4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.63■□□□□ 0.57
LCHNA4D1U4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.63■□□□□ 0.57
LCHNA4D1U4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
LCHNA4D1U4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCHNA4D1U4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 AC099522.2-201ENST00000607001 744 ntBASIC18.62■□□□□ 0.57
LCHNA4D1U4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.62■□□□□ 0.57
LCHNA4D1U4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCHNA4D1U4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.61■□□□□ 0.57
LCHNA4D1U4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 BX276092.7-203ENST00000637198 1536 ntBASIC18.61■□□□□ 0.57
LCHNA4D1U4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 AL355306.1-201ENST00000415580 579 ntBASIC18.61■□□□□ 0.57
LCHNA4D1U4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 AC067863.1-201ENST00000494933 530 ntBASIC18.61■□□□□ 0.57
LCHNA4D1U4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 AC026120.1-201ENST00000611536 926 ntBASIC18.61■□□□□ 0.57
LCHNA4D1U4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LCHNA4D1U4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCHNA4D1U4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.6■□□□□ 0.57
LCHNA4D1U4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCHNA4D1U4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms