Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL390955.1-201ENST00000428694 934 ntBASIC19■□□□□ 0.63
CCDC66A2RUB6 DUTP2-201ENST00000519164 463 ntBASIC19■□□□□ 0.63
CCDC66A2RUB6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC66A2RUB6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19■□□□□ 0.63
CCDC66A2RUB6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19■□□□□ 0.63
CCDC66A2RUB6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC66A2RUB6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19■□□□□ 0.63
CCDC66A2RUB6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC66A2RUB6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 PCDHA14-201ENST00000506751 2298 ntBASIC18.99■□□□□ 0.63
CCDC66A2RUB6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 TSPY14P-201ENST00000303979 915 ntBASIC18.99■□□□□ 0.63
CCDC66A2RUB6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 TSPY7P-201ENST00000431358 1114 ntBASIC18.99■□□□□ 0.63
CCDC66A2RUB6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC66A2RUB6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 MIR1238-201ENST00000408483 83 ntBASIC18.98■□□□□ 0.63
CCDC66A2RUB6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC66A2RUB6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC66A2RUB6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms