Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 CRYGEP-201ENST00000412192 528 ntBASIC25.63■■□□□ 1.69
HFM1A2PYH4 AC004832.2-201ENST00000426397 482 ntBASIC25.63■■□□□ 1.69
HFM1A2PYH4 RHOQP3-201ENST00000437982 621 ntBASIC25.63■■□□□ 1.69
HFM1A2PYH4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC25.62■■□□□ 1.69
HFM1A2PYH4 AC018845.2-201ENST00000568326 409 ntBASIC25.62■■□□□ 1.69
HFM1A2PYH4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HFM1A2PYH4 REXO1L3P-201ENST00000622202 1288 ntBASIC25.62■■□□□ 1.69
HFM1A2PYH4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 PC-214ENST00000628663 1470 ntTSL 5 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC25.61■■□□□ 1.69
HFM1A2PYH4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
HFM1A2PYH4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
HFM1A2PYH4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HFM1A2PYH4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 MIR940-201ENST00000401276 94 ntBASIC25.59■■□□□ 1.69
HFM1A2PYH4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
HFM1A2PYH4 AC018470.1-201ENST00000624790 3129 ntBASIC25.59■■□□□ 1.69
HFM1A2PYH4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HFM1A2PYH4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 YBX2P1-201ENST00000394192 760 ntBASIC25.58■■□□□ 1.69
HFM1A2PYH4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
HFM1A2PYH4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms