Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC092171.3-201ENST00000610122 2651 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 DOC2GP-204ENST00000639052 2548 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC083849.1-201ENST00000615227 514 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC006011.2-201ENST00000621313 1158 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 KRT8P10-201ENST00000450021 1447 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC090340.1-201ENST00000620778 4980 ntBASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-3A0A0A0MS03 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-3A0A0A0MS03 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-3A0A0A0MS03 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV5-3A0A0A0MS03 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-3A0A0A0MS03 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL353593.2-201ENST00000602529 1483 ntBASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 FRMD8P1-201ENST00000440433 1524 ntBASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms