Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 KRT8P11-201ENST00000409686 1436 ntBASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.61□□□□□ -0.39
CHTOPQ9Y3Y2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 AC009090.5-201ENST00000624886 2285 ntBASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 AC016769.1-201ENST00000409132 1010 ntBASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PRSS44-201ENST00000515154 1146 ntBASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 AC011767.1-201ENST00000617410 1153 ntBASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CHTOPQ9Y3Y2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms