Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX2IPQ9Y2D8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 PHGDH-209ENST00000641074 1780 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC009947.1-201ENST00000444350 727 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC092183.1-201ENST00000469884 875 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC136632.2-201ENST00000512891 861 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC116407.2-201ENST00000613639 860 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AC079781.4-201ENST00000641908 219 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 KRT8P47-201ENST00000604727 1398 ntBASIC18.81■□□□□ 0.6
SSX2IPQ9Y2D8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 LTB4R2-202ENST00000528054 3092 ntBASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 AC090164.3-201ENST00000610780 2143 ntBASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 WIZP1-201ENST00000531444 2299 ntBASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX2IPQ9Y2D8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SSX2IPQ9Y2D8 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms