Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SERBP1P5-201ENST00000510079 1181 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 KRT8P23-201ENST00000560090 1207 ntBASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.04■□□□□ 0.96
ZC3H4Q9UPT8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 SPDYE14P-201ENST00000442619 822 ntBASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 AC026150.2-201ENST00000564693 1156 ntBASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 AC109462.3-201ENST00000573934 613 ntBASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZC3H4Q9UPT8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 AL499627.1-201ENST00000569373 2188 ntBASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 AC093484.2-201ENST00000580996 2166 ntBASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ZC3H4Q9UPT8 AC008677.1-201ENST00000519230 1561 ntBASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 KRT17P7-201ENST00000451704 1104 ntBASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 AC097493.3-201ENST00000509725 367 ntBASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.02■□□□□ 0.95
ZC3H4Q9UPT8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 AL032819.2-201ENST00000624543 2162 ntBASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 AL590787.1-201ENST00000568856 1315 ntBASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 AC129492.6-201ENST00000611383 1305 ntBASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 GPR53P-205ENST00000457298 1084 ntBASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 IGHV3-52-201ENST00000519770 353 ntBASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ZC3H4Q9UPT8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms