Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIT1Q9P2V4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ABALON-201ENST00000629058 1903 ntBASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 VN2R19P-201ENST00000442399 1052 ntBASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AC092183.1-201ENST00000469884 875 ntBASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRIT1Q9P2V4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AC138028.4-201ENST00000564984 1845 ntBASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 LINC00982-205ENST00000420957 435 ntBASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIT1Q9P2V4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 GPR89P-201ENST00000407924 1495 ntBASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
LRIT1Q9P2V4 PRSS29P-201ENST00000440800 595 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms