Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 AC012618.2-201ENST00000428058 849 ntBASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 AP005242.2-201ENST00000580065 1175 ntBASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 ITM2C-210ENST00000620962 501 ntBASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 REXO1L10P-201ENST00000615707 1290 ntBASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 REXO1L12P-201ENST00000622156 912 ntBASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
C12orf4Q9NQ89 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 ABHD17AP1-201ENST00000358206 933 ntBASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 RPS2P55-201ENST00000397318 883 ntBASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 SLC25A1P2-201ENST00000430693 912 ntBASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 AL355355.2-201ENST00000442321 338 ntBASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 AC107956.1-201ENST00000494359 873 ntBASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.27■□□□□ 0.04
C12orf4Q9NQ89 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.27■□□□□ 0.03
C12orf4Q9NQ89 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms