Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 TPSP2-201ENST00000561760 610 ntBASIC16.73■□□□□ 0.27
BRF2Q9HAW0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 AP000550.4-202ENST00000639755 178 ntBASIC16.73■□□□□ 0.27
BRF2Q9HAW0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BRF2Q9HAW0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.72■□□□□ 0.27
BRF2Q9HAW0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 AP002383.4-201ENST00000442518 975 ntBASIC16.72■□□□□ 0.27
BRF2Q9HAW0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 AC093525.9-201ENST00000624961 1746 ntBASIC16.72■□□□□ 0.27
BRF2Q9HAW0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.72■□□□□ 0.27
BRF2Q9HAW0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 SLC25A1P3-201ENST00000395415 828 ntBASIC16.71■□□□□ 0.27
BRF2Q9HAW0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AP002414.4-201ENST00000589764 1148 ntBASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AD001527.2-201ENST00000622994 785 ntBASIC16.71■□□□□ 0.27
BRF2Q9HAW0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.71■□□□□ 0.27
BRF2Q9HAW0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.71■□□□□ 0.27
BRF2Q9HAW0 AD000864.1-201ENST00000624076 2295 ntBASIC16.71■□□□□ 0.27
BRF2Q9HAW0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BRF2Q9HAW0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 LINC02012-201ENST00000608206 1725 ntBASIC16.7■□□□□ 0.26
BRF2Q9HAW0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BRF2Q9HAW0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms