Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 AC073111.5-205ENST00000641717 521 ntBASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 REXO1L11P-201ENST00000620964 1927 ntBASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMIM3Q9BZL3 AC067930.6-201ENST00000623257 4947 ntBASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 AC080038.1-201ENST00000611274 1154 ntBASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 LINC01451-201ENST00000623792 534 ntBASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM3Q9BZL3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SMIM3Q9BZL3 AC132938.6-201ENST00000623828 1655 ntBASIC14.33□□□□□ -0.11
SMIM3Q9BZL3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 UNC93B4-201ENST00000505679 747 ntBASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 AC083906.2-201ENST00000511578 360 ntBASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 AC011298.2-201ENST00000617989 482 ntBASIC14.33□□□□□ -0.12
SMIM3Q9BZL3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms