Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 AL671277.1-201ENST00000429656 993 ntBASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 Z92544.3-201ENST00000624747 417 ntBASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH11YQ9BZA8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AL390955.2-201ENST00000603032 514 ntBASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AL138781.2-201ENST00000617896 1843 ntBASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDH11YQ9BZA8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDH11YQ9BZA8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AC005237.2-201ENST00000434368 219 ntBASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AC079140.1-201ENST00000508039 487 ntBASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDH11YQ9BZA8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 BX323043.1-201ENST00000641006 1765 ntBASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH11YQ9BZA8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms