Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AL513477.1-201ENST00000602865 2407 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC087386.2-201ENST00000623212 4637 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 MIR149-201ENST00000384879 89 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 OR2A1-AS1-207ENST00000486094 819 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC116407.2-201ENST00000613639 860 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LINC01451-201ENST00000623792 534 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 HLA-B-256ENST00000639848 1089 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AL356309.3-201ENST00000624132 1934 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SDHAP2-201ENST00000455183 2001 ntBASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms