Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCM2Q9BSQ5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 KLF4P1-201ENST00000412782 1185 ntBASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 STK19B-204ENST00000512515 211 ntBASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCM2Q9BSQ5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 LYSMD4-203ENST00000378904 2122 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AL138688.1-201ENST00000624851 1594 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AKR1C7P-201ENST00000305623 895 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 EMBP1-201ENST00000458200 901 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 MTDHP3-201ENST00000594186 672 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AC008608.2-201ENST00000606089 416 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 AL355877.3-201ENST00000622820 899 ntBASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CCM2Q9BSQ5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CCM2Q9BSQ5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.21■□□□□ 0.34
CCM2Q9BSQ5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.21■□□□□ 0.34
CCM2Q9BSQ5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
CCM2Q9BSQ5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CCM2Q9BSQ5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
CCM2Q9BSQ5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCM2Q9BSQ5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCM2Q9BSQ5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.19■□□□□ 0.34
CCM2Q9BSQ5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms