Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 EMBP1-201ENST00000458200 901 ntBASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCGF1Q9BSM1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 POM121L3P-201ENST00000419331 1163 ntBASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 KRT16P4-201ENST00000453883 522 ntBASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 AC112698.1-201ENST00000510299 916 ntBASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCGF1Q9BSM1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 AC132938.6-201ENST00000623828 1655 ntBASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.71□□□□□ -0.06
PCGF1Q9BSM1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 FAAHP1-202ENST00000446499 1238 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 DUTP2-201ENST00000519164 463 ntBASIC14.7□□□□□ -0.06
PCGF1Q9BSM1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms