Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 PCDHB19P-201ENST00000570871 2371 ntBASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HDHD3Q9BSH5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC092597.1-201ENST00000487352 616 ntBASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC010203.1-204ENST00000548782 407 ntBASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC046185.3-201ENST00000623228 1824 ntBASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 AC116353.5-201ENST00000638148 1699 ntBASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HDHD3Q9BSH5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 AL596275.1-201ENST00000423464 877 ntBASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 HLA-F-220ENST00000434407 884 ntBASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDHD3Q9BSH5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDHD3Q9BSH5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms