Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 AC092068.3-201ENST00000587894 2016 ntBASIC17.07■□□□□ 0.32
EBF4Q9BQW3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 AL391005.1-201ENST00000623953 2435 ntBASIC17.07■□□□□ 0.32
EBF4Q9BQW3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EBF4Q9BQW3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 PRORSD1P-201ENST00000295112 541 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 AC098590.1-201ENST00000468126 897 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EBF4Q9BQW3 AC132872.4-202ENST00000622924 2756 ntBASIC17.06■□□□□ 0.32
EBF4Q9BQW3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 MIR1238-201ENST00000408483 83 ntBASIC17.05■□□□□ 0.32
EBF4Q9BQW3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.05■□□□□ 0.32
EBF4Q9BQW3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms