Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC38A3Q99624 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC38A3Q99624 ABALON-201ENST00000629058 1903 ntBASIC16.96■□□□□ 0.3
SLC38A3Q99624 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SLC38A3Q99624 NCF1C-201ENST00000438382 1427 ntBASIC16.96■□□□□ 0.3
SLC38A3Q99624 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC38A3Q99624 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC38A3Q99624 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.95■□□□□ 0.3
SLC38A3Q99624 KRT18P27-201ENST00000427733 1299 ntBASIC16.95■□□□□ 0.3
SLC38A3Q99624 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 AL591424.1-201ENST00000442569 1213 ntBASIC16.95■□□□□ 0.3
SLC38A3Q99624 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC38A3Q99624 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC38A3Q99624 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 KRT18P13-201ENST00000400056 1290 ntBASIC16.94■□□□□ 0.3
SLC38A3Q99624 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 AC092865.5-201ENST00000545435 363 ntBASIC16.94■□□□□ 0.3
SLC38A3Q99624 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 AC140113.2-201ENST00000604370 208 ntBASIC16.94■□□□□ 0.3
SLC38A3Q99624 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 FAM197Y3-203ENST00000618346 717 ntBASIC16.94■□□□□ 0.3
SLC38A3Q99624 AC004706.3-202ENST00000621574 984 ntBASIC16.94■□□□□ 0.3
SLC38A3Q99624 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC38A3Q99624 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC38A3Q99624 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 AC006538.3-201ENST00000612495 578 ntBASIC16.93■□□□□ 0.3
SLC38A3Q99624 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC38A3Q99624 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC38A3Q99624 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC38A3Q99624 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC38A3Q99624 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms