Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GPS2P2-201ENST00000430745 888 ntBASIC18.06■□□□□ 0.48
CDCA3Q99618 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.06■□□□□ 0.48
CDCA3Q99618 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 AC125807.1-201ENST00000483097 614 ntBASIC18.06■□□□□ 0.48
CDCA3Q99618 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA3Q99618 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA3Q99618 AC005225.4-201ENST00000557330 545 ntBASIC18.06■□□□□ 0.48
CDCA3Q99618 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.06■□□□□ 0.48
CDCA3Q99618 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CDCA3Q99618 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA3Q99618 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CDCA3Q99618 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA3Q99618 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDCA3Q99618 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 KRT18P55-202ENST00000578578 1546 ntBASIC18.05■□□□□ 0.48
CDCA3Q99618 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDCA3Q99618 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.05■□□□□ 0.48
CDCA3Q99618 RBPMS2P1-201ENST00000437762 623 ntBASIC18.05■□□□□ 0.48
CDCA3Q99618 IGHV3-62-201ENST00000520057 340 ntBASIC18.05■□□□□ 0.48
CDCA3Q99618 AC107918.2-201ENST00000530817 355 ntBASIC18.05■□□□□ 0.48
CDCA3Q99618 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.05■□□□□ 0.48
CDCA3Q99618 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 RN7SL204P-201ENST00000582831 262 ntBASIC18.05■□□□□ 0.48
CDCA3Q99618 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCA3Q99618 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDCA3Q99618 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.05■□□□□ 0.48
CDCA3Q99618 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CDCA3Q99618 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA3Q99618 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 AL020996.1-203ENST00000536896 2307 ntBASIC18.04■□□□□ 0.48
CDCA3Q99618 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.04■□□□□ 0.48
CDCA3Q99618 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.04■□□□□ 0.48
CDCA3Q99618 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.04■□□□□ 0.48
CDCA3Q99618 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.04■□□□□ 0.48
CDCA3Q99618 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.04■□□□□ 0.48
CDCA3Q99618 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.04■□□□□ 0.48
CDCA3Q99618 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.04■□□□□ 0.48
CDCA3Q99618 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDCA3Q99618 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.04■□□□□ 0.48
CDCA3Q99618 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.04■□□□□ 0.48
CDCA3Q99618 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDCA3Q99618 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.03■□□□□ 0.48
CDCA3Q99618 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.03■□□□□ 0.48
CDCA3Q99618 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.03■□□□□ 0.48
CDCA3Q99618 SPCS2P4-201ENST00000436160 681 ntBASIC18.03■□□□□ 0.48
CDCA3Q99618 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.03■□□□□ 0.48
CDCA3Q99618 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.03■□□□□ 0.48
CDCA3Q99618 DUX4L17-201ENST00000557360 1267 ntBASIC18.03■□□□□ 0.48
CDCA3Q99618 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.03■□□□□ 0.48
CDCA3Q99618 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.03■□□□□ 0.48
CDCA3Q99618 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CDCA3Q99618 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms