Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.04■□□□□ 0.32
PKP4Q99569 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PKP4Q99569 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP4Q99569 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP4Q99569 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PKP4Q99569 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 AC132938.5-201ENST00000624980 1813 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.03■□□□□ 0.32
PKP4Q99569 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.03■□□□□ 0.32
PKP4Q99569 TSPY19P-201ENST00000418461 509 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.03■□□□□ 0.32
PKP4Q99569 TSPY18P-201ENST00000441642 509 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.03■□□□□ 0.32
PKP4Q99569 AC132008.2-207ENST00000454517 770 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 KRT18P31-201ENST00000506277 1292 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 STK25P1-201ENST00000585406 838 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.03■□□□□ 0.32
PKP4Q99569 AL732292.2-201ENST00000609649 430 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 AC073592.5-201ENST00000624854 528 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PKP4Q99569 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PKP4Q99569 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PKP4Q99569 CROCCP2-202ENST00000412962 2773 ntBASIC17.03■□□□□ 0.32
PKP4Q99569 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PKP4Q99569 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PKP4Q99569 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PKP4Q99569 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.02■□□□□ 0.32
PKP4Q99569 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PKP4Q99569 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PKP4Q99569 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.02■□□□□ 0.32
PKP4Q99569 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PKP4Q99569 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PKP4Q99569 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.02■□□□□ 0.32
PKP4Q99569 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.02■□□□□ 0.32
PKP4Q99569 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.02■□□□□ 0.32
PKP4Q99569 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PKP4Q99569 AP000867.4-201ENST00000641616 219 ntBASIC17.02■□□□□ 0.32
PKP4Q99569 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PKP4Q99569 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PKP4Q99569 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.02■□□□□ 0.31
PKP4Q99569 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PKP4Q99569 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PKP4Q99569 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PKP4Q99569 PMPCAP1-201ENST00000508114 1576 ntBASIC17.02■□□□□ 0.31
PKP4Q99569 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PKP4Q99569 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.31
PKP4Q99569 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PKP4Q99569 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PKP4Q99569 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PKP4Q99569 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.01■□□□□ 0.31
PKP4Q99569 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PKP4Q99569 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.01■□□□□ 0.31
PKP4Q99569 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PKP4Q99569 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.01■□□□□ 0.31
PKP4Q99569 ABCD1P5-201ENST00000445663 754 ntBASIC17.01■□□□□ 0.31
PKP4Q99569 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.01■□□□□ 0.31
PKP4Q99569 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms