Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AL662844.4-201ENST00000606367 2838 ntBASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB3IPQ96QF0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 MCCD1P1-208ENST00000445732 328 ntBASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 AC105036.2-201ENST00000569468 176 ntBASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB3IPQ96QF0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 AC046185.3-201ENST00000623228 1824 ntBASIC17.08■□□□□ 0.33
RAB3IPQ96QF0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 LINC02012-201ENST00000608206 1725 ntBASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 AC126755.1-201ENST00000525846 6405 ntBASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RAB3IPQ96QF0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms