Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 PHGDH-209ENST00000641074 1780 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 AL353807.1-201ENST00000427475 662 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 FAM207BP-201ENST00000447172 505 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 AC142086.2-201ENST00000569753 217 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 AL353708.3-201ENST00000610272 989 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 KRT16P1-201ENST00000399124 1418 ntBASIC13.28□□□□□ -0.28
AP1S3Q96PC3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP1S3Q96PC3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
AP1S3Q96PC3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 MIR564-202ENST00000385049 94 ntBASIC13.27□□□□□ -0.29
AP1S3Q96PC3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 AC026366.1-201ENST00000488803 879 ntBASIC13.27□□□□□ -0.29
AP1S3Q96PC3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 AL031985.4-201ENST00000642138 673 ntBASIC13.27□□□□□ -0.29
AP1S3Q96PC3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 AC008741.2-201ENST00000612792 3115 ntBASIC13.27□□□□□ -0.29
AP1S3Q96PC3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms