Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 CEND1P1-201ENST00000451006 455 ntBASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 RPS15P9-201ENST00000494093 319 ntBASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC004790.2-201ENST00000623588 572 ntBASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC46A1Q96NT5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 GPR89P-201ENST00000407924 1495 ntBASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AC092364.2-202ENST00000597012 1073 ntBASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 SIRPAP1-201ENST00000448467 1770 ntBASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC46A1Q96NT5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 AL049757.1-201ENST00000616842 1596 ntBASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 AP000997.3-201ENST00000623333 2250 ntBASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 AC132938.5-201ENST00000624980 1813 ntBASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 AL078644.1-201ENST00000609881 752 ntBASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC46A1Q96NT5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms