Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CALR3Q96L12 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
CALR3Q96L12 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CALR3Q96L12 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CALR3Q96L12 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.52■□□□□ 0.56
CALR3Q96L12 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CALR3Q96L12 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.52■□□□□ 0.56
CALR3Q96L12 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.52■□□□□ 0.56
CALR3Q96L12 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 IGHV3-52-201ENST00000519770 353 ntBASIC18.52■□□□□ 0.56
CALR3Q96L12 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.52■□□□□ 0.56
CALR3Q96L12 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.52■□□□□ 0.56
CALR3Q96L12 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.52■□□□□ 0.56
CALR3Q96L12 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.52■□□□□ 0.56
CALR3Q96L12 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.52■□□□□ 0.56
CALR3Q96L12 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CALR3Q96L12 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CALR3Q96L12 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.52■□□□□ 0.55
CALR3Q96L12 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CALR3Q96L12 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CALR3Q96L12 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CALR3Q96L12 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CALR3Q96L12 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.51■□□□□ 0.55
CALR3Q96L12 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.51■□□□□ 0.55
CALR3Q96L12 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.51■□□□□ 0.55
CALR3Q96L12 YBX1P2-201ENST00000489612 999 ntBASIC18.51■□□□□ 0.55
CALR3Q96L12 AC010203.1-204ENST00000548782 407 ntBASIC18.51■□□□□ 0.55
CALR3Q96L12 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.51■□□□□ 0.55
CALR3Q96L12 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.51■□□□□ 0.55
CALR3Q96L12 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.51■□□□□ 0.55
CALR3Q96L12 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CALR3Q96L12 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.5■□□□□ 0.55
CALR3Q96L12 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
CALR3Q96L12 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.5■□□□□ 0.55
CALR3Q96L12 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.5■□□□□ 0.55
CALR3Q96L12 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 AC093525.9-201ENST00000624961 1746 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CALR3Q96L12 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 HBZP1-201ENST00000354915 429 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 AC113347.1-201ENST00000413321 391 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.5■□□□□ 0.55
CALR3Q96L12 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms