Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 IGHGP-201ENST00000390555 1178 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 SLC25A3P1-201ENST00000443844 931 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 ATP5G1P1-201ENST00000448724 379 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 AL441883.1-201ENST00000566170 1045 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 AL139327.4-201ENST00000612362 153 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.69■□□□□ 0.26
ITCHQ96J02 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.69■□□□□ 0.26
ITCHQ96J02 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.69■□□□□ 0.26
ITCHQ96J02 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.69■□□□□ 0.26
ITCHQ96J02 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ITCHQ96J02 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 STARP1-201ENST00000397973 869 ntBASIC16.68■□□□□ 0.26
ITCHQ96J02 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ITCHQ96J02 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.68■□□□□ 0.26
ITCHQ96J02 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.68■□□□□ 0.26
ITCHQ96J02 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.68■□□□□ 0.26
ITCHQ96J02 MTCL1P1-201ENST00000446207 792 ntBASIC16.68■□□□□ 0.26
ITCHQ96J02 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 AP003733.1-201ENST00000491725 852 ntBASIC16.68■□□□□ 0.26
ITCHQ96J02 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.68■□□□□ 0.26
ITCHQ96J02 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 ZNF444P1-201ENST00000559497 298 ntBASIC16.68■□□□□ 0.26
ITCHQ96J02 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.68■□□□□ 0.26
ITCHQ96J02 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ITCHQ96J02 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ITCHQ96J02 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
ITCHQ96J02 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ITCHQ96J02 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.68■□□□□ 0.26
ITCHQ96J02 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ITCHQ96J02 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ITCHQ96J02 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ITCHQ96J02 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ITCHQ96J02 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 SPDYE15P-201ENST00000424157 909 ntBASIC16.67■□□□□ 0.26
ITCHQ96J02 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.67■□□□□ 0.26
ITCHQ96J02 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.67■□□□□ 0.26
ITCHQ96J02 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
ITCHQ96J02 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
ITCHQ96J02 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ITCHQ96J02 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ITCHQ96J02 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ITCHQ96J02 AL353692.3-201ENST00000407031 1396 ntBASIC16.66■□□□□ 0.26
ITCHQ96J02 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms