Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 MRPS18AP1-201ENST00000414458 589 ntBASIC18.85■□□□□ 0.61
LRCH3Q96II8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 AC079140.1-201ENST00000508039 487 ntBASIC18.85■□□□□ 0.61
LRCH3Q96II8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRCH3Q96II8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LRCH3Q96II8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 AC004233.3-201ENST00000607794 1269 ntBASIC18.84■□□□□ 0.61
LRCH3Q96II8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRCH3Q96II8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRCH3Q96II8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH3Q96II8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LRCH3Q96II8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LRCH3Q96II8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.83■□□□□ 0.61
LRCH3Q96II8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRCH3Q96II8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
LRCH3Q96II8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRCH3Q96II8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.83■□□□□ 0.6
LRCH3Q96II8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
LRCH3Q96II8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRCH3Q96II8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC002056.1-201ENST00000395613 760 ntBASIC18.82■□□□□ 0.6
LRCH3Q96II8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC004890.2-204ENST00000481968 304 ntBASIC18.82■□□□□ 0.6
LRCH3Q96II8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC099522.2-201ENST00000607001 744 ntBASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 AC009118.2-201ENST00000613275 655 ntBASIC18.82■□□□□ 0.6
LRCH3Q96II8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.82■□□□□ 0.6
LRCH3Q96II8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCH3Q96II8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms