Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AC073621.1-201ENST00000392730 636 ntBASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AL353135.1-201ENST00000606729 504 ntBASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AL139424.1-201ENST00000607572 797 ntBASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ECHDC3Q96DC8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ECHDC3Q96DC8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 LINC00982-205ENST00000420957 435 ntBASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 AC093909.1-201ENST00000504731 1122 ntBASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 LINC00896-202ENST00000609602 2128 ntBASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ECHDC3Q96DC8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AC105339.3-201ENST00000560043 636 ntBASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AC116407.3-201ENST00000623905 1129 ntBASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ECHDC3Q96DC8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ECHDC3Q96DC8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms