Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 HLA-A-201ENST00000376802 1334 ntBASIC17.37■□□□□ 0.37
SCAMP4Q969E2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AL031284.1-201ENST00000419297 478 ntBASIC17.36■□□□□ 0.37
SCAMP4Q969E2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 PRYP5-201ENST00000451909 266 ntBASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SIGLEC30P-201ENST00000455569 941 ntBASIC17.36■□□□□ 0.37
SCAMP4Q969E2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AC079776.4-201ENST00000511039 504 ntBASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AL049840.3-201ENST00000602669 611 ntBASIC17.36■□□□□ 0.37
SCAMP4Q969E2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCAMP4Q969E2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 AC005332.8-201ENST00000622750 2735 ntBASIC17.35■□□□□ 0.37
SCAMP4Q969E2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 FAM215A-202ENST00000632077 792 ntBASIC17.35■□□□□ 0.37
SCAMP4Q969E2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 AC046185.3-201ENST00000623228 1824 ntBASIC17.35■□□□□ 0.37
SCAMP4Q969E2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCAMP4Q969E2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCAMP4Q969E2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms