Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTP4A1Q93096 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.75■□□□□ 0.11
PTP4A1Q93096 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 IGHGP-201ENST00000390555 1178 ntBASIC15.74■□□□□ 0.11
PTP4A1Q93096 FAM8A6P-201ENST00000407496 1135 ntBASIC15.74■□□□□ 0.11
PTP4A1Q93096 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 AC096633.1-201ENST00000422446 749 ntBASIC15.74■□□□□ 0.11
PTP4A1Q93096 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 AC092597.1-201ENST00000487352 616 ntBASIC15.74■□□□□ 0.11
PTP4A1Q93096 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTP4A1Q93096 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTP4A1Q93096 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 SPDYE15P-201ENST00000424157 909 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 DUX4L26-201ENST00000489078 1255 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 AC063952.2-201ENST00000498792 1227 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 AC105020.1-201ENST00000435356 2205 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 AL353692.3-201ENST00000407031 1396 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A1Q93096 AC046185.3-201ENST00000623228 1824 ntBASIC15.73■□□□□ 0.11
PTP4A1Q93096 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A1Q93096 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms