Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AF106564.1-201ENST00000607058 2553 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 ZNF890P-202ENST00000530367 1156 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 FTLP5-201ENST00000586853 534 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 PGAM1P5-201ENST00000548011 764 ntBASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SYNE2Q8WXH0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AC087499.5-201ENST00000452760 1342 ntBASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AC012158.2-201ENST00000536546 354 ntBASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 AC018529.1-201ENST00000613063 361 ntBASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 TEX28P1-201ENST00000613479 1221 ntBASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 TEX28P2-201ENST00000617764 1221 ntBASIC6.96□□□□□ -1.29
SYNE2Q8WXH0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC097065.1-201ENST00000425737 517 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC020914.3-201ENST00000594712 304 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 NDUFV2P1-201ENST00000596415 907 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 REEP5-205ENST00000504247 480 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 MIR3147-201ENST00000577811 66 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AL353726.2-201ENST00000623259 884 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC007225.1-201ENST00000566331 1836 ntBASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SYNE2Q8WXH0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE2Q8WXH0 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms