Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC142381.1-201ENST00000426099 345 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC008738.7-201ENST00000609744 511 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC004790.1-201ENST00000612686 536 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC138969.3-201ENST00000546612 1459 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC138932.2-201ENST00000548268 1459 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 AC126755.4-201ENST00000549796 1459 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 RNU1-129P-201ENST00000384064 167 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 U1.21-201ENST00000580816 167 ntBASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL22A1Q8NFW1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL22A1Q8NFW1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL22A1Q8NFW1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 MIR6799-201ENST00000620297 69 ntBASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 GRAMD4P3-201ENST00000621665 1669 ntBASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.01■■□□□ 1.27
COL22A1Q8NFW1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23■■□□□ 1.27
COL22A1Q8NFW1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL22A1Q8NFW1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms