Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST2Q8NFU1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.81■□□□□ 0.6
BEST2Q8NFU1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BEST2Q8NFU1 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
BEST2Q8NFU1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BEST2Q8NFU1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.81■□□□□ 0.6
BEST2Q8NFU1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 AC133963.1-201ENST00000504166 1679 ntBASIC18.8■□□□□ 0.6
BEST2Q8NFU1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 SLC25A1P1-201ENST00000528351 927 ntBASIC18.8■□□□□ 0.6
BEST2Q8NFU1 AC105339.3-201ENST00000560043 636 ntBASIC18.8■□□□□ 0.6
BEST2Q8NFU1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 AC116407.3-201ENST00000623905 1129 ntBASIC18.8■□□□□ 0.6
BEST2Q8NFU1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
BEST2Q8NFU1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AC046185.3-201ENST00000623228 1824 ntBASIC18.79■□□□□ 0.6
BEST2Q8NFU1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AC012640.2-201ENST00000561606 901 ntBASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 AF228730.7-201ENST00000641842 219 ntBASIC18.79■□□□□ 0.6
BEST2Q8NFU1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST2Q8NFU1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AC092910.1-201ENST00000482027 1129 ntBASIC18.78■□□□□ 0.6
BEST2Q8NFU1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AC097637.2-201ENST00000624096 1997 ntBASIC18.78■□□□□ 0.6
BEST2Q8NFU1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 AC007613.1-201ENST00000572811 2597 ntBASIC18.78■□□□□ 0.6
BEST2Q8NFU1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms