Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.72■□□□□ 0.27
SRFBP1Q8NEF9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.72■□□□□ 0.27
SRFBP1Q8NEF9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SRFBP1Q8NEF9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AC016396.2-201ENST00000562575 1417 ntBASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 RCN1P2-201ENST00000398357 915 ntBASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 AL353593.2-201ENST00000602529 1483 ntBASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 SIRPAP1-201ENST00000448467 1770 ntBASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SRFBP1Q8NEF9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SRFBP1Q8NEF9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRFBP1Q8NEF9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRFBP1Q8NEF9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SRFBP1Q8NEF9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SRFBP1Q8NEF9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 MIR5100-201ENST00000579544 119 ntBASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 AL591684.3-201ENST00000605187 298 ntBASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 AL121772.3-201ENST00000610840 674 ntBASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 AD001527.2-201ENST00000622994 785 ntBASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRFBP1Q8NEF9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms