Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 AC246785.2-201ENST00000432512 513 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 KRT17P6-201ENST00000453795 1220 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 AC074051.2-201ENST00000565115 352 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 AC092329.2-201ENST00000598402 547 ntBASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
SIMC1Q8NDZ2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 AC097374.2-201ENST00000618617 1306 ntBASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 BNIP3P18-201ENST00000593976 575 ntBASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 AC133963.1-201ENST00000504166 1679 ntBASIC16.5■□□□□ 0.23
SIMC1Q8NDZ2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms