Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 PRELID1P1-202ENST00000567272 903 ntBASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AC012313.10-201ENST00000623509 926 ntBASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 AL118508.1-201ENST00000613502 2345 ntBASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFCAB3Q8N7B9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 KRT18P38-201ENST00000449496 1282 ntBASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AC117500.1-201ENST00000497352 755 ntBASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AL353708.1-201ENST00000567904 1257 ntBASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AC022148.2-201ENST00000586176 560 ntBASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFCAB3Q8N7B9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 AL355312.1-201ENST00000407115 2176 ntBASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CICP6-201ENST00000457191 2729 ntBASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFCAB3Q8N7B9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms