Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAM1L1Q8N609 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 AL662844.1-201ENST00000546340 181 ntBASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAM1L1Q8N609 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAM1L1Q8N609 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AL135999.2-201ENST00000622438 1686 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AC009078.2-202ENST00000463353 338 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 SLC25A6P4-201ENST00000586535 553 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AL773604.1-201ENST00000617417 272 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AL589182.2-201ENST00000619332 1049 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 AC016396.2-201ENST00000562575 1417 ntBASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAM1L1Q8N609 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 NCF1C-201ENST00000438382 1427 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 MRPL3P1-201ENST00000400109 1033 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 AC026396.1-201ENST00000419388 421 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 LAGE3P1-201ENST00000425356 484 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 RPS2P1-201ENST00000434010 821 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 OR7E14P-202ENST00000530490 1290 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 AC107918.4-202ENST00000641623 219 ntBASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAM1L1Q8N609 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms