Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.77■□□□□ 0.44
PGBD3Q8N328 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
PGBD3Q8N328 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PGBD3Q8N328 AC134684.3-201ENST00000641758 218 ntBASIC17.77■□□□□ 0.44
PGBD3Q8N328 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.77■□□□□ 0.44
PGBD3Q8N328 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PGBD3Q8N328 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PGBD3Q8N328 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PGBD3Q8N328 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PGBD3Q8N328 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 ABALON-201ENST00000629058 1903 ntBASIC17.76■□□□□ 0.43
PGBD3Q8N328 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC093010.1-201ENST00000473625 1624 ntBASIC17.76■□□□□ 0.43
PGBD3Q8N328 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PGBD3Q8N328 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PGBD3Q8N328 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 SIGLEC16-201ENST00000599858 1437 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 COX5BP2-201ENST00000392354 334 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 AC073621.1-201ENST00000392730 636 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 CRYGEP-201ENST00000412192 528 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 PMS2P2-201ENST00000425039 1128 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 KRT18P27-201ENST00000427733 1299 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AL589182.2-201ENST00000619332 1049 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AC073592.4-201ENST00000623827 446 ntBASIC17.75■□□□□ 0.43
PGBD3Q8N328 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
PGBD3Q8N328 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PGBD3Q8N328 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD3Q8N328 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
PGBD3Q8N328 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PGBD3Q8N328 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms