Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 AC002558.1-201ENST00000488906 803 ntBASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 AC122714.2-201ENST00000502787 707 ntBASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 AC074051.2-201ENST00000565115 352 ntBASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 AC092329.2-201ENST00000598402 547 ntBASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC116Q8IYX3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC116Q8IYX3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 AC103564.2-201ENST00000432853 1299 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 AC019129.2-201ENST00000609837 1235 ntBASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC116Q8IYX3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 IGHV3-47-201ENST00000425060 335 ntBASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 IGHV3-52-201ENST00000519770 353 ntBASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 AL139327.4-201ENST00000612362 153 ntBASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 AL049757.1-201ENST00000616842 1596 ntBASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC116Q8IYX3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms