Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC087388.1-201ENST00000571370 1112 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC008687.5-201ENST00000593746 558 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC011558.1-201ENST00000623459 338 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 AC009949.1-201ENST00000623048 1830 ntBASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CRLF3Q8IUI8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 TSPY5P-201ENST00000426936 936 ntBASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 LINC01238-205ENST00000567549 1107 ntBASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AL023973.1-201ENST00000624619 620 ntBASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.5■□□□□ 0.39
CRLF3Q8IUI8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 AC140113.3-201ENST00000605663 199 ntBASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 AC010240.3-201ENST00000607688 395 ntBASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CRLF3Q8IUI8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms