Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC109462.3-201ENST00000573934 613 ntBASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC011840.4-201ENST00000578471 627 ntBASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AC019129.2-201ENST00000609837 1235 ntBASIC16.19■□□□□ 0.18
VRK2Q86Y07 AL353801.3-201ENST00000609898 542 ntBASIC16.19■□□□□ 0.18
VRK2Q86Y07 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 AL049597.2-201ENST00000565575 961 ntBASIC16.18■□□□□ 0.18
VRK2Q86Y07 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 NTF6B-201ENST00000591913 560 ntBASIC16.18■□□□□ 0.18
VRK2Q86Y07 AL138831.2-201ENST00000606564 490 ntBASIC16.18■□□□□ 0.18
VRK2Q86Y07 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.18■□□□□ 0.18
VRK2Q86Y07 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 AC005332.1-201ENST00000577698 1310 ntBASIC16.18■□□□□ 0.18
VRK2Q86Y07 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VRK2Q86Y07 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AC091607.1-201ENST00000490318 1060 ntBASIC16.17■□□□□ 0.18
VRK2Q86Y07 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AL121956.5-201ENST00000625261 221 ntBASIC16.17■□□□□ 0.18
VRK2Q86Y07 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AC116353.5-201ENST00000638148 1699 ntBASIC16.17■□□□□ 0.18
VRK2Q86Y07 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.17■□□□□ 0.18
VRK2Q86Y07 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VRK2Q86Y07 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms